Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.32□□□□□ -0.76
VtnP29788 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.32□□□□□ -0.76
VtnP29788 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.32□□□□□ -0.76
VtnP29788 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC10.32□□□□□ -0.76
VtnP29788 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
VtnP29788 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.32□□□□□ -0.76
VtnP29788 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VtnP29788 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
VtnP29788 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
VtnP29788 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.31□□□□□ -0.76
VtnP29788 Gm16071-201ENSMUST00000119589 793 ntBASIC10.31□□□□□ -0.76
VtnP29788 Gm9089-201ENSMUST00000122027 526 ntBASIC10.31□□□□□ -0.76
VtnP29788 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Gm4654-201ENSMUST00000183305 982 ntBASIC10.31□□□□□ -0.76
VtnP29788 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Gm17826-201ENSMUST00000189720 798 ntBASIC10.31□□□□□ -0.76
VtnP29788 Gm34023-201ENSMUST00000195539 217 ntBASIC10.31□□□□□ -0.76
VtnP29788 Gm43520-201ENSMUST00000197996 164 ntBASIC10.31□□□□□ -0.76
VtnP29788 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.31□□□□□ -0.76
VtnP29788 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.31□□□□□ -0.76
VtnP29788 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.31□□□□□ -0.76
VtnP29788 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
VtnP29788 Gm8420-201ENSMUST00000097103 598 ntBASIC10.31□□□□□ -0.76
VtnP29788 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.31□□□□□ -0.76
VtnP29788 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VtnP29788 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
VtnP29788 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.3□□□□□ -0.76
VtnP29788 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
VtnP29788 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
VtnP29788 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VtnP29788 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
VtnP29788 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.3□□□□□ -0.76
VtnP29788 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms