Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.35□□□□□ -0.59
Nckap1P28660 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.35□□□□□ -0.59
Nckap1P28660 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nckap1P28660 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.35□□□□□ -0.59
Nckap1P28660 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm8111-201ENSMUST00000117659 987 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm22379-201ENSMUST00000157480 131 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.34□□□□□ -0.59
Nckap1P28660 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nckap1P28660 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nckap1P28660 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nckap1P28660 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm43380-201ENSMUST00000200421 220 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 Gm44008-201ENSMUST00000204345 412 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 Gm45856-201ENSMUST00000212752 416 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Nckap1P28660 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.34□□□□□ -0.59
Nckap1P28660 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Nckap1P28660 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Nckap1P28660 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Nckap1P28660 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nckap1P28660 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Nckap1P28660 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nckap1P28660 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nckap1P28660 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nckap1P28660 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.33□□□□□ -0.6
Nckap1P28660 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Nckap1P28660 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms