Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tnfrsf1bP25119 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12616-201ENSMUST00000118594 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm6485-201ENSMUST00000160676 439 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12624-201ENSMUST00000177615 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12621-201ENSMUST00000177760 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12615-201ENSMUST00000177970 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12622-201ENSMUST00000177975 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12627-201ENSMUST00000178412 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12625-201ENSMUST00000179122 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12614-201ENSMUST00000179586 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm12613-201ENSMUST00000180323 382 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm45398-201ENSMUST00000210561 165 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm45856-201ENSMUST00000212752 416 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 AC155266.1-201ENSMUST00000220762 904 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm23105-201ENSMUST00000083719 134 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf1bP25119 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm14263-201ENSMUST00000117955 746 ntBASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm16166-201ENSMUST00000118291 787 ntBASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm14776-201ENSMUST00000121029 887 ntBASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm17391-201ENSMUST00000171036 126 ntBASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf1bP25119 Gm19459-201ENSMUST00000176240 835 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms