Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdh3P10287 Gm15236-201ENSMUST00000117309 379 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Gm14208-201ENSMUST00000119645 678 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Gm14277-201ENSMUST00000121195 360 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Gm14017-201ENSMUST00000121934 386 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdh3P10287 Gm24749-201ENSMUST00000157838 343 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.57□□□□□ -0.72
Cdh3P10287 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdh3P10287 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Gm5455-201ENSMUST00000058710 715 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cdh3P10287 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.57□□□□□ -0.72
Cdh3P10287 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdh3P10287 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdh3P10287 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdh3P10287 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdh3P10287 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cdh3P10287 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC10.56□□□□□ -0.72
Cdh3P10287 Gm43339-201ENSMUST00000200032 1606 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Cdh3P10287 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.56□□□□□ -0.72
Cdh3P10287 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Cdh3P10287 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.56□□□□□ -0.72
Cdh3P10287 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Cdh3P10287 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cdh3P10287 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.56□□□□□ -0.72
Cdh3P10287 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cdh3P10287 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Cdh3P10287 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Gm45186-201ENSMUST00000206874 478 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Gm17931-201ENSMUST00000208132 634 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Gm18212-201ENSMUST00000211678 889 ntBASIC10.56□□□□□ -0.72
Cdh3P10287 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cdh3P10287 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdh3P10287 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdh3P10287 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms