Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.97□□□□□ -0.81
P04224 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Gm37008-201ENSMUST00000195712 319 ntBASIC9.97□□□□□ -0.81
P04224 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.97□□□□□ -0.81
P04224 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
P04224 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.97□□□□□ -0.81
P04224 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.97□□□□□ -0.81
P04224 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.97□□□□□ -0.81
P04224 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.97□□□□□ -0.81
P04224 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.97□□□□□ -0.81
P04224 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
P04224 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
P04224 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.97□□□□□ -0.81
P04224 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
P04224 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
P04224 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P04224 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
P04224 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
P04224 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
P04224 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
P04224 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.96□□□□□ -0.81
P04224 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.96□□□□□ -0.81
P04224 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.96□□□□□ -0.81
P04224 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
P04224 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
P04224 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.82
P04224 Gm14247-201ENSMUST00000120950 237 ntBASIC9.96□□□□□ -0.82
P04224 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
P04224 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
P04224 Gm45784-201ENSMUST00000188360 142 ntBASIC9.96□□□□□ -0.82
P04224 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.96□□□□□ -0.82
P04224 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.96□□□□□ -0.82
P04224 Gm807-202ENSMUST00000224929 408 ntBASIC9.96□□□□□ -0.82
P04224 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
P04224 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.96□□□□□ -0.82
P04224 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
P04224 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
P04224 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
P04224 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
P04224 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
P04224 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
P04224 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms