Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04213 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
P04213 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.87□□□□□ -0.67
P04213 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04213 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
P04213 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
P04213 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Gm14193-201ENSMUST00000105067 153 ntBASIC10.86□□□□□ -0.67
P04213 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
P04213 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.86□□□□□ -0.67
P04213 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.86□□□□□ -0.67
P04213 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.86□□□□□ -0.67
P04213 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.86□□□□□ -0.67
P04213 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
P04213 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.86□□□□□ -0.67
P04213 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.86□□□□□ -0.67
P04213 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.86□□□□□ -0.67
P04213 Gm8574-201ENSMUST00000203207 924 ntBASIC10.86□□□□□ -0.67
P04213 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.86□□□□□ -0.67
P04213 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.86□□□□□ -0.67
P04213 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
P04213 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.86□□□□□ -0.67
P04213 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
P04213 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
P04213 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.86□□□□□ -0.67
P04213 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.86□□□□□ -0.67
P04213 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.86□□□□□ -0.67
P04213 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04213 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
P04213 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.85□□□□□ -0.67
P04213 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.85□□□□□ -0.67
P04213 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Gm8111-201ENSMUST00000117659 987 ntBASIC10.85□□□□□ -0.67
P04213 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.85□□□□□ -0.67
P04213 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
P04213 Mir6927-201ENSMUST00000184494 71 ntBASIC10.85□□□□□ -0.67
P04213 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.85□□□□□ -0.67
P04213 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.85□□□□□ -0.67
P04213 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.85□□□□□ -0.67
P04213 Gm8342-201ENSMUST00000209839 757 ntBASIC10.85□□□□□ -0.67
P04213 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.85□□□□□ -0.67
P04213 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.85□□□□□ -0.67
P04213 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.85□□□□□ -0.67
P04213 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.85□□□□□ -0.67
P04213 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Mir433-201ENSMUST00000093564 124 ntBASIC10.85□□□□□ -0.67
P04213 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P04213 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.85□□□□□ -0.67
P04213 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P04213 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
P04213 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
P04213 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P04213 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms