Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.17□□□□□ -0.62
Slc1a6O35544 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.17□□□□□ -0.62
Slc1a6O35544 Gm45113-201ENSMUST00000207518 165 ntBASIC11.17□□□□□ -0.62
Slc1a6O35544 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Slc1a6O35544 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Slc1a6O35544 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Slc1a6O35544 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Slc1a6O35544 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Slc1a6O35544 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc1a6O35544 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.16□□□□□ -0.62
Slc1a6O35544 Mir1896-201ENSMUST00000122641 81 ntBASIC11.16□□□□□ -0.62
Slc1a6O35544 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.16□□□□□ -0.62
Slc1a6O35544 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.16□□□□□ -0.62
Slc1a6O35544 Gm42867-201ENSMUST00000202995 469 ntBASIC11.16□□□□□ -0.62
Slc1a6O35544 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.16□□□□□ -0.62
Slc1a6O35544 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc1a6O35544 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc1a6O35544 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.15□□□□□ -0.62
Slc1a6O35544 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.15□□□□□ -0.62
Slc1a6O35544 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm2991-201ENSMUST00000173338 480 ntBASIC11.15□□□□□ -0.62
Slc1a6O35544 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm37301-201ENSMUST00000195412 568 ntBASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.15□□□□□ -0.62
Slc1a6O35544 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Slc1a6O35544 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc1a6O35544 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms