Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Dchs1E9PVD3 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Dchs1E9PVD3 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.77□□□□□ -0.84
Dchs1E9PVD3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Dchs1E9PVD3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Dchs1E9PVD3 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Dchs1E9PVD3 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Dchs1E9PVD3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Dchs1E9PVD3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.77□□□□□ -0.85
Dchs1E9PVD3 AC133496.1-201ENSMUST00000223891 743 ntBASIC9.77□□□□□ -0.85
Dchs1E9PVD3 AC134913.2-201ENSMUST00000225017 771 ntBASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Gm45893-201ENSMUST00000211899 247 ntBASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Dchs1E9PVD3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm13426-201ENSMUST00000117887 795 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm3945-201ENSMUST00000196637 683 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm32102-201ENSMUST00000196885 241 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm44498-201ENSMUST00000199509 111 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm45745-201ENSMUST00000211447 1180 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 AC154407.1-201ENSMUST00000226777 526 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm7589-201ENSMUST00000085631 534 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm14699-201ENSMUST00000122340 228 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Zfp419-201ENSMUST00000173446 916 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 AC163638.2-201ENSMUST00000224920 827 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.76□□□□□ -0.85
Dchs1E9PVD3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms