Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps29Q9QZ88 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps29Q9QZ88 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Vps29Q9QZ88 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps29Q9QZ88 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps29Q9QZ88 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps29Q9QZ88 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps29Q9QZ88 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Gm15820-201ENSMUST00000201566 728 ntBASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Gm5812-201ENSMUST00000061073 957 ntBASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vps29Q9QZ88 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.43■□□□□ 0.7
Vps29Q9QZ88 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps29Q9QZ88 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.41■□□□□ 0.7
Vps29Q9QZ88 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps29Q9QZ88 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps29Q9QZ88 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps29Q9QZ88 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vps29Q9QZ88 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Vps29Q9QZ88 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Vps29Q9QZ88 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Gm7143-201ENSMUST00000222811 859 ntBASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vps29Q9QZ88 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps29Q9QZ88 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps29Q9QZ88 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Vps29Q9QZ88 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms