Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Tdp2Q9JJX7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
Tdp2Q9JJX7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Tdp2Q9JJX7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp2Q9JJX7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tdp2Q9JJX7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tdp2Q9JJX7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.06■□□□□ 0.8
Tdp2Q9JJX7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tdp2Q9JJX7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tdp2Q9JJX7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tdp2Q9JJX7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tdp2Q9JJX7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tdp2Q9JJX7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tdp2Q9JJX7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20■□□□□ 0.79
Tdp2Q9JJX7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20■□□□□ 0.79
Tdp2Q9JJX7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tdp2Q9JJX7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tdp2Q9JJX7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tdp2Q9JJX7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tdp2Q9JJX7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tdp2Q9JJX7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms