Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rcl1Q9JJT0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rcl1Q9JJT0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rcl1Q9JJT0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.06■□□□□ 0.32
Rcl1Q9JJT0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rcl1Q9JJT0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rcl1Q9JJT0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rcl1Q9JJT0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rcl1Q9JJT0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rcl1Q9JJT0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rcl1Q9JJT0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rcl1Q9JJT0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Rcl1Q9JJT0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.02■□□□□ 0.31
Rcl1Q9JJT0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rcl1Q9JJT0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Rcl1Q9JJT0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rcl1Q9JJT0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rcl1Q9JJT0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rcl1Q9JJT0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rcl1Q9JJT0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rcl1Q9JJT0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rcl1Q9JJT0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rcl1Q9JJT0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rcl1Q9JJT0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rcl1Q9JJT0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Gm15820-201ENSMUST00000201566 728 ntBASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rcl1Q9JJT0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.97■□□□□ 0.31
Rcl1Q9JJT0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rcl1Q9JJT0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms