Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3h8Q9JJ48 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Gm12821-201ENSMUST00000120022 600 ntBASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3h8Q9JJ48 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zc3h8Q9JJ48 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zc3h8Q9JJ48 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Zc3h8Q9JJ48 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.87■□□□□ 0.61
Zc3h8Q9JJ48 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zc3h8Q9JJ48 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Zc3h8Q9JJ48 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Zc3h8Q9JJ48 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Gm27454-201ENSMUST00000185090 204 ntBASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Zc3h8Q9JJ48 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Zc3h8Q9JJ48 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zc3h8Q9JJ48 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zc3h8Q9JJ48 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Zc3h8Q9JJ48 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3h8Q9JJ48 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3h8Q9JJ48 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3h8Q9JJ48 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.83■□□□□ 0.6
Zc3h8Q9JJ48 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Zc3h8Q9JJ48 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3h8Q9JJ48 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Zc3h8Q9JJ48 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Zc3h8Q9JJ48 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3h8Q9JJ48 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3h8Q9JJ48 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.81■□□□□ 0.6
Zc3h8Q9JJ48 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zc3h8Q9JJ48 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
Zc3h8Q9JJ48 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Zc3h8Q9JJ48 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3h8Q9JJ48 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Zc3h8Q9JJ48 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3h8Q9JJ48 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3h8Q9JJ48 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zc3h8Q9JJ48 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Zc3h8Q9JJ48 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Zc3h8Q9JJ48 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms