Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgn3Q9DCB1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgn3Q9DCB1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgn3Q9DCB1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hmgn3Q9DCB1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgn3Q9DCB1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgn3Q9DCB1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn3Q9DCB1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.05■□□□□ 0.64
Hmgn3Q9DCB1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgn3Q9DCB1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.05■□□□□ 0.64
Hmgn3Q9DCB1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmgn3Q9DCB1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgn3Q9DCB1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn3Q9DCB1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn3Q9DCB1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn3Q9DCB1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.02■□□□□ 0.64
Hmgn3Q9DCB1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn3Q9DCB1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn3Q9DCB1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgn3Q9DCB1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Gm6311-201ENSMUST00000073790 878 ntBASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Hmgn3Q9DCB1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgn3Q9DCB1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn3Q9DCB1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn3Q9DCB1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn3Q9DCB1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn3Q9DCB1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn3Q9DCB1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgn3Q9DCB1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgn3Q9DCB1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms