Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Gm45102-201ENSMUST00000207427 857 ntBASIC17.48■□□□□ 0.39
Cir1Q9DA19 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cir1Q9DA19 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.48■□□□□ 0.39
Cir1Q9DA19 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cir1Q9DA19 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cir1Q9DA19 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cir1Q9DA19 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Cir1Q9DA19 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cir1Q9DA19 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.47■□□□□ 0.39
Cir1Q9DA19 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cir1Q9DA19 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Gm13238-201ENSMUST00000117655 780 ntBASIC17.46■□□□□ 0.39
Cir1Q9DA19 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.46■□□□□ 0.39
Cir1Q9DA19 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cir1Q9DA19 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.46■□□□□ 0.38
Cir1Q9DA19 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cir1Q9DA19 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cir1Q9DA19 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cir1Q9DA19 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cir1Q9DA19 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cir1Q9DA19 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cir1Q9DA19 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cir1Q9DA19 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cir1Q9DA19 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.44■□□□□ 0.38
Cir1Q9DA19 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cir1Q9DA19 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cir1Q9DA19 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.42■□□□□ 0.38
Cir1Q9DA19 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cir1Q9DA19 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.42■□□□□ 0.38
Cir1Q9DA19 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.42■□□□□ 0.38
Cir1Q9DA19 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.42■□□□□ 0.38
Cir1Q9DA19 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cir1Q9DA19 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cir1Q9DA19 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cir1Q9DA19 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cir1Q9DA19 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cir1Q9DA19 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms