Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Upk1aQ9D132 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Upk1aQ9D132 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Upk1aQ9D132 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Upk1aQ9D132 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Upk1aQ9D132 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Upk1aQ9D132 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.33■□□□□ 0.69
Upk1aQ9D132 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upk1aQ9D132 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.33■□□□□ 0.68
Upk1aQ9D132 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upk1aQ9D132 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.33■□□□□ 0.68
Upk1aQ9D132 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Mir6538-201ENSMUST00000183713 110 ntBASIC19.32■□□□□ 0.68
Upk1aQ9D132 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Upk1aQ9D132 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk1aQ9D132 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk1aQ9D132 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.3■□□□□ 0.68
Upk1aQ9D132 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Upk1aQ9D132 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Gm10420-201ENSMUST00000121713 882 ntBASIC19.29■□□□□ 0.68
Upk1aQ9D132 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Upk1aQ9D132 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk1aQ9D132 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1aQ9D132 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1aQ9D132 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1aQ9D132 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1aQ9D132 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Upk1aQ9D132 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upk1aQ9D132 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Upk1aQ9D132 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk1aQ9D132 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Upk1aQ9D132 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upk1aQ9D132 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1aQ9D132 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1aQ9D132 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk1aQ9D132 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Upk1aQ9D132 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Upk1aQ9D132 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk1aQ9D132 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.24■□□□□ 0.67
Upk1aQ9D132 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk1aQ9D132 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1aQ9D132 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upk1aQ9D132 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms