Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chaf1bQ9D0N7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.04■□□□□ 0.64
Chaf1bQ9D0N7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chaf1bQ9D0N7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Chaf1bQ9D0N7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chaf1bQ9D0N7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.04■□□□□ 0.64
Chaf1bQ9D0N7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chaf1bQ9D0N7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chaf1bQ9D0N7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Chaf1bQ9D0N7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.02■□□□□ 0.64
Chaf1bQ9D0N7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Chaf1bQ9D0N7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chaf1bQ9D0N7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chaf1bQ9D0N7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chaf1bQ9D0N7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chaf1bQ9D0N7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chaf1bQ9D0N7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chaf1bQ9D0N7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 AC116713.1-201ENSMUST00000215074 430 ntBASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Chaf1bQ9D0N7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chaf1bQ9D0N7 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chaf1bQ9D0N7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chaf1bQ9D0N7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms