Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ndc80Q9D0F1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ndc80Q9D0F1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ndc80Q9D0F1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ndc80Q9D0F1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ndc80Q9D0F1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Ndc80Q9D0F1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ndc80Q9D0F1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ndc80Q9D0F1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ndc80Q9D0F1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc80Q9D0F1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.58■□□□□ 0.89
Ndc80Q9D0F1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc80Q9D0F1 Etf1-202ENSMUST00000180351 108 ntBASIC20.58■□□□□ 0.89
Ndc80Q9D0F1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.58■□□□□ 0.89
Ndc80Q9D0F1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc80Q9D0F1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ndc80Q9D0F1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ndc80Q9D0F1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.58■□□□□ 0.88
Ndc80Q9D0F1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Ndc80Q9D0F1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.58■□□□□ 0.88
Ndc80Q9D0F1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndc80Q9D0F1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
Ndc80Q9D0F1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Gm7417-201ENSMUST00000192950 473 ntBASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ndc80Q9D0F1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ndc80Q9D0F1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc80Q9D0F1 Rps24-207ENSMUST00000224568 714 ntBASIC20.53■□□□□ 0.88
Ndc80Q9D0F1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc80Q9D0F1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc80Q9D0F1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndc80Q9D0F1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Ndc80Q9D0F1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ndc80Q9D0F1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ndc80Q9D0F1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 Gm45102-201ENSMUST00000207427 857 ntBASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ndc80Q9D0F1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms