Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ssbp1Q9CYR0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ssbp1Q9CYR0 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ssbp1Q9CYR0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ssbp1Q9CYR0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.81□□□□□ -0.04
Ssbp1Q9CYR0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ssbp1Q9CYR0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ssbp1Q9CYR0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms