Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.26■□□□□ 0.83
Ssu72Q9CY97 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Gm27502-201ENSMUST00000183495 199 ntBASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.25■□□□□ 0.83
Ssu72Q9CY97 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.25■□□□□ 0.83
Ssu72Q9CY97 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssu72Q9CY97 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssu72Q9CY97 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Gm7332-201ENSMUST00000118351 454 ntBASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssu72Q9CY97 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssu72Q9CY97 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Ssu72Q9CY97 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssu72Q9CY97 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssu72Q9CY97 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssu72Q9CY97 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Ssu72Q9CY97 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ssu72Q9CY97 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssu72Q9CY97 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssu72Q9CY97 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ssu72Q9CY97 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssu72Q9CY97 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.19■□□□□ 0.82
Ssu72Q9CY97 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.19■□□□□ 0.82
Ssu72Q9CY97 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ssu72Q9CY97 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssu72Q9CY97 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssu72Q9CY97 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ssu72Q9CY97 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.18■□□□□ 0.82
Ssu72Q9CY97 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ssu72Q9CY97 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssu72Q9CY97 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Ssu72Q9CY97 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ssu72Q9CY97 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssu72Q9CY97 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssu72Q9CY97 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssu72Q9CY97 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssu72Q9CY97 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.16■□□□□ 0.82
Ssu72Q9CY97 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssu72Q9CY97 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssu72Q9CY97 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.15■□□□□ 0.82
Ssu72Q9CY97 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.15■□□□□ 0.82
Ssu72Q9CY97 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ssu72Q9CY97 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.15■□□□□ 0.82
Ssu72Q9CY97 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms