Protein–RNA interactions for Protein: Q9CXS0

3110018I06Rik, RIKEN cDNA 3110018I06 gene, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3110018I06RikQ9CXS0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
3110018I06RikQ9CXS0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
3110018I06RikQ9CXS0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
3110018I06RikQ9CXS0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
3110018I06RikQ9CXS0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
3110018I06RikQ9CXS0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
3110018I06RikQ9CXS0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
3110018I06RikQ9CXS0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
3110018I06RikQ9CXS0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
3110018I06RikQ9CXS0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
3110018I06RikQ9CXS0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.52■□□□□ 0.08
3110018I06RikQ9CXS0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
3110018I06RikQ9CXS0 Gm22238-201ENSMUST00000175222 88 ntBASIC15.52■□□□□ 0.08
3110018I06RikQ9CXS0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
3110018I06RikQ9CXS0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.52■□□□□ 0.07
3110018I06RikQ9CXS0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
3110018I06RikQ9CXS0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
3110018I06RikQ9CXS0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
3110018I06RikQ9CXS0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
3110018I06RikQ9CXS0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
3110018I06RikQ9CXS0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
3110018I06RikQ9CXS0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
3110018I06RikQ9CXS0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
3110018I06RikQ9CXS0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
3110018I06RikQ9CXS0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
3110018I06RikQ9CXS0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.46■□□□□ 0.07
3110018I06RikQ9CXS0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.46■□□□□ 0.07
3110018I06RikQ9CXS0 Gm7143-201ENSMUST00000222811 859 ntBASIC15.46■□□□□ 0.07
3110018I06RikQ9CXS0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
3110018I06RikQ9CXS0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
3110018I06RikQ9CXS0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms