Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx47Q9CWX9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx47Q9CWX9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.93■□□□□ 0.94
Ddx47Q9CWX9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx47Q9CWX9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx47Q9CWX9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx47Q9CWX9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ddx47Q9CWX9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ddx47Q9CWX9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx47Q9CWX9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.91■□□□□ 0.94
Ddx47Q9CWX9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx47Q9CWX9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx47Q9CWX9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx47Q9CWX9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ddx47Q9CWX9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Gm6311-201ENSMUST00000073790 878 ntBASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx47Q9CWX9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
Ddx47Q9CWX9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx47Q9CWX9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx47Q9CWX9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx47Q9CWX9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ddx47Q9CWX9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx47Q9CWX9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx47Q9CWX9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx47Q9CWX9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx47Q9CWX9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.88■□□□□ 0.93
Ddx47Q9CWX9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx47Q9CWX9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx47Q9CWX9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ddx47Q9CWX9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx47Q9CWX9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx47Q9CWX9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx47Q9CWX9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Gm16437-201ENSMUST00000025669 507 ntBASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx47Q9CWX9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 Scarna2-201ENSMUST00000157560 414 ntBASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx47Q9CWX9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Gm9806-201ENSMUST00000051080 552 ntBASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx47Q9CWX9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx47Q9CWX9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx47Q9CWX9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.83■□□□□ 0.93
Ddx47Q9CWX9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx47Q9CWX9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx47Q9CWX9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms