Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Rnf135Q9CWS1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf135Q9CWS1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf135Q9CWS1 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rnf135Q9CWS1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf135Q9CWS1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf135Q9CWS1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rnf135Q9CWS1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf135Q9CWS1 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.1■□□□□ 0.97
Rnf135Q9CWS1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf135Q9CWS1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf135Q9CWS1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.09■□□□□ 0.97
Rnf135Q9CWS1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf135Q9CWS1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.09■□□□□ 0.97
Rnf135Q9CWS1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf135Q9CWS1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnf135Q9CWS1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rnf135Q9CWS1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Rnf135Q9CWS1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rnf135Q9CWS1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.08■□□□□ 0.97
Rnf135Q9CWS1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.08■□□□□ 0.97
Rnf135Q9CWS1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Rnf135Q9CWS1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf135Q9CWS1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf135Q9CWS1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rnf135Q9CWS1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf135Q9CWS1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf135Q9CWS1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf135Q9CWS1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms