Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pfdn1Q9CWM4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pfdn1Q9CWM4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pfdn1Q9CWM4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pfdn1Q9CWM4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pfdn1Q9CWM4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pfdn1Q9CWM4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.85■□□□□ 0.45
Pfdn1Q9CWM4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pfdn1Q9CWM4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pfdn1Q9CWM4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn1Q9CWM4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn1Q9CWM4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn1Q9CWM4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn1Q9CWM4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pfdn1Q9CWM4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn1Q9CWM4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn1Q9CWM4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn1Q9CWM4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.83■□□□□ 0.44
Pfdn1Q9CWM4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pfdn1Q9CWM4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pfdn1Q9CWM4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pfdn1Q9CWM4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pfdn1Q9CWM4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pfdn1Q9CWM4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms