Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc3Q9CW03 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.91■■□□□ 1.42
Smc3Q9CW03 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc3Q9CW03 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smc3Q9CW03 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.9■■□□□ 1.42
Smc3Q9CW03 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.9■■□□□ 1.42
Smc3Q9CW03 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smc3Q9CW03 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Smc3Q9CW03 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smc3Q9CW03 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Smc3Q9CW03 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Smc3Q9CW03 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc3Q9CW03 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc3Q9CW03 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smc3Q9CW03 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smc3Q9CW03 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.89■■□□□ 1.41
Smc3Q9CW03 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Smc3Q9CW03 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Smc3Q9CW03 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.88■■□□□ 1.41
Smc3Q9CW03 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc3Q9CW03 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc3Q9CW03 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smc3Q9CW03 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc3Q9CW03 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc3Q9CW03 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.86■■□□□ 1.41
Smc3Q9CW03 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Gm43566-201ENSMUST00000196851 808 ntBASIC23.86■■□□□ 1.41
Smc3Q9CW03 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.86■■□□□ 1.41
Smc3Q9CW03 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc3Q9CW03 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc3Q9CW03 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Smc3Q9CW03 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc3Q9CW03 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc3Q9CW03 Gm5921-201ENSMUST00000075898 882 ntBASIC23.85■■□□□ 1.41
Smc3Q9CW03 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc3Q9CW03 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.85■■□□□ 1.41
Smc3Q9CW03 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc3Q9CW03 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Smc3Q9CW03 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc3Q9CW03 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc3Q9CW03 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.83■■□□□ 1.41
Smc3Q9CW03 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.82■■□□□ 1.4
Smc3Q9CW03 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc3Q9CW03 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.81■■□□□ 1.4
Smc3Q9CW03 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.81■■□□□ 1.4
Smc3Q9CW03 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.81■■□□□ 1.4
Smc3Q9CW03 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Smc3Q9CW03 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Smc3Q9CW03 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc3Q9CW03 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc3Q9CW03 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.8■■□□□ 1.4
Smc3Q9CW03 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.8■■□□□ 1.4
Smc3Q9CW03 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc3Q9CW03 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc3Q9CW03 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc3Q9CW03 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc3Q9CW03 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc3Q9CW03 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc3Q9CW03 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smc3Q9CW03 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Smc3Q9CW03 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Smc3Q9CW03 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms