Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.19■■□□□ 1.3
Vta1Q9CR26 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vta1Q9CR26 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vta1Q9CR26 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Vta1Q9CR26 Gm7291-201ENSMUST00000199147 382 ntBASIC23.17■■□□□ 1.3
Vta1Q9CR26 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.17■■□□□ 1.3
Vta1Q9CR26 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.17■■□□□ 1.3
Vta1Q9CR26 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vta1Q9CR26 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Vta1Q9CR26 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Vta1Q9CR26 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.16■■□□□ 1.3
Vta1Q9CR26 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.16■■□□□ 1.3
Vta1Q9CR26 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.16■■□□□ 1.3
Vta1Q9CR26 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.16■■□□□ 1.3
Vta1Q9CR26 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.16■■□□□ 1.3
Vta1Q9CR26 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC23.16■■□□□ 1.3
Vta1Q9CR26 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vta1Q9CR26 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.15■■□□□ 1.3
Vta1Q9CR26 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vta1Q9CR26 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vta1Q9CR26 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vta1Q9CR26 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.15■■□□□ 1.3
Vta1Q9CR26 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vta1Q9CR26 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Vta1Q9CR26 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Vta1Q9CR26 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.14■■□□□ 1.3
Vta1Q9CR26 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Vta1Q9CR26 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Vta1Q9CR26 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC23.14■■□□□ 1.29
Vta1Q9CR26 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Vta1Q9CR26 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Vta1Q9CR26 Gm26571-201ENSMUST00000181399 666 ntBASIC23.14■■□□□ 1.29
Vta1Q9CR26 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.14■■□□□ 1.29
Vta1Q9CR26 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Vta1Q9CR26 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Vta1Q9CR26 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.13■■□□□ 1.29
Vta1Q9CR26 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vta1Q9CR26 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Vta1Q9CR26 Gm10849-201ENSMUST00000100397 618 ntBASIC23.12■■□□□ 1.29
Vta1Q9CR26 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Vta1Q9CR26 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Vta1Q9CR26 Gm29257-201ENSMUST00000186115 639 ntBASIC23.12■■□□□ 1.29
Vta1Q9CR26 Gm42569-201ENSMUST00000200539 472 ntBASIC23.12■■□□□ 1.29
Vta1Q9CR26 Gm42642-201ENSMUST00000200683 355 ntBASIC23.12■■□□□ 1.29
Vta1Q9CR26 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vta1Q9CR26 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Vta1Q9CR26 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
Vta1Q9CR26 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Gm27405-201ENSMUST00000184201 112 ntBASIC23.11■■□□□ 1.29
Vta1Q9CR26 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vta1Q9CR26 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vta1Q9CR26 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Vta1Q9CR26 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.1■■□□□ 1.29
Vta1Q9CR26 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Vta1Q9CR26 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vta1Q9CR26 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vta1Q9CR26 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vta1Q9CR26 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Vta1Q9CR26 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Vta1Q9CR26 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.09■■□□□ 1.29
Vta1Q9CR26 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vta1Q9CR26 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vta1Q9CR26 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vta1Q9CR26 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Vta1Q9CR26 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Vta1Q9CR26 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms