Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Gm43530-201ENSMUST00000195920 274 ntBASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sec61bQ9CQS8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Gm5297-201ENSMUST00000198555 1171 ntBASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Gm2011-201ENSMUST00000203124 1263 ntBASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sec61bQ9CQS8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sec61bQ9CQS8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sec61bQ9CQS8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sec61bQ9CQS8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sec61bQ9CQS8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms