Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm7Q9CQQ8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lsm7Q9CQQ8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lsm7Q9CQQ8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lsm7Q9CQQ8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm7Q9CQQ8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lsm7Q9CQQ8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Lsm7Q9CQQ8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm7Q9CQQ8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Lsm7Q9CQQ8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lsm7Q9CQQ8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm7Q9CQQ8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm7Q9CQQ8 Mir7075-201ENSMUST00000184187 82 ntBASIC20.51■□□□□ 0.87
Lsm7Q9CQQ8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm7Q9CQQ8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Lsm7Q9CQQ8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lsm7Q9CQQ8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.51■□□□□ 0.87
Lsm7Q9CQQ8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lsm7Q9CQQ8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Serp2-204ENSMUST00000228055 705 ntBASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lsm7Q9CQQ8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.48■□□□□ 0.87
Lsm7Q9CQQ8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsm7Q9CQQ8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms