Protein–RNA interactions for Protein: Q9CQH0

Pdzk1ip1, PDZK1-interacting protein 1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzk1ip1Q9CQH0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdzk1ip1Q9CQH0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdzk1ip1Q9CQH0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 Terc-201ENSMUST00000082862 423 ntBASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdzk1ip1Q9CQH0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdzk1ip1Q9CQH0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzk1ip1Q9CQH0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pdzk1ip1Q9CQH0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pdzk1ip1Q9CQH0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pdzk1ip1Q9CQH0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzk1ip1Q9CQH0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdzk1ip1Q9CQH0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdzk1ip1Q9CQH0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pdzk1ip1Q9CQH0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdzk1ip1Q9CQH0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdzk1ip1Q9CQH0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdzk1ip1Q9CQH0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms