Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcc1Q99LI2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
Clcc1Q99LI2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcc1Q99LI2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Clcc1Q99LI2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcc1Q99LI2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clcc1Q99LI2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcc1Q99LI2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcc1Q99LI2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcc1Q99LI2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcc1Q99LI2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcc1Q99LI2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Clcc1Q99LI2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Clcc1Q99LI2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcc1Q99LI2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcc1Q99LI2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.08■□□□□ 0.81
Clcc1Q99LI2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcc1Q99LI2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcc1Q99LI2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcc1Q99LI2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Clcc1Q99LI2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcc1Q99LI2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.07■□□□□ 0.8
Clcc1Q99LI2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcc1Q99LI2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcc1Q99LI2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcc1Q99LI2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcc1Q99LI2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcc1Q99LI2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcc1Q99LI2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.02■□□□□ 0.8
Clcc1Q99LI2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Clcc1Q99LI2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.02■□□□□ 0.8
Clcc1Q99LI2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcc1Q99LI2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clcc1Q99LI2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
Clcc1Q99LI2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.02■□□□□ 0.79
Clcc1Q99LI2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.02■□□□□ 0.79
Clcc1Q99LI2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.02■□□□□ 0.79
Clcc1Q99LI2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcc1Q99LI2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcc1Q99LI2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms