Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a3Q921V7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc44a3Q921V7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Slc44a3Q921V7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a3Q921V7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a3Q921V7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc44a3Q921V7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Etf1-202ENSMUST00000180351 108 ntBASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc44a3Q921V7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc44a3Q921V7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc44a3Q921V7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc44a3Q921V7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.08■□□□□ 0.8
Slc44a3Q921V7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Slc44a3Q921V7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Slc44a3Q921V7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a3Q921V7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a3Q921V7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a3Q921V7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a3Q921V7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc44a3Q921V7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a3Q921V7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a3Q921V7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.06■□□□□ 0.8
Slc44a3Q921V7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.06■□□□□ 0.8
Slc44a3Q921V7 Gm9959-201ENSMUST00000068277 390 ntBASIC20.06■□□□□ 0.8
Slc44a3Q921V7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slc44a3Q921V7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.06■□□□□ 0.8
Slc44a3Q921V7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a3Q921V7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc44a3Q921V7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc44a3Q921V7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a3Q921V7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc44a3Q921V7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a3Q921V7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc44a3Q921V7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.04■□□□□ 0.8
Slc44a3Q921V7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a3Q921V7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc44a3Q921V7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc44a3Q921V7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc44a3Q921V7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc44a3Q921V7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc44a3Q921V7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc44a3Q921V7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc44a3Q921V7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Slc44a3Q921V7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc44a3Q921V7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20■□□□□ 0.79
Slc44a3Q921V7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc44a3Q921V7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc44a3Q921V7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20■□□□□ 0.79
Slc44a3Q921V7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc44a3Q921V7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc44a3Q921V7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
Slc44a3Q921V7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms