Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb1Q91Y08 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb1Q91Y08 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb1Q91Y08 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Gm9959-201ENSMUST00000068277 390 ntBASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb1Q91Y08 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb1Q91Y08 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb1Q91Y08 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.13■□□□□ 0.97
Pcdhb1Q91Y08 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhb1Q91Y08 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb1Q91Y08 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb1Q91Y08 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb1Q91Y08 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhb1Q91Y08 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb1Q91Y08 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.11■□□□□ 0.97
Pcdhb1Q91Y08 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb1Q91Y08 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb1Q91Y08 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb1Q91Y08 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb1Q91Y08 Gm9870-201ENSMUST00000063874 645 ntBASIC21.1■□□□□ 0.97
Pcdhb1Q91Y08 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb1Q91Y08 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhb1Q91Y08 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb1Q91Y08 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb1Q91Y08 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb1Q91Y08 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb1Q91Y08 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
Pcdhb1Q91Y08 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb1Q91Y08 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb1Q91Y08 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb1Q91Y08 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Pcdhb1Q91Y08 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb1Q91Y08 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb1Q91Y08 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb1Q91Y08 Gm45102-201ENSMUST00000207427 857 ntBASIC21.07■□□□□ 0.96
Pcdhb1Q91Y08 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb1Q91Y08 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb1Q91Y08 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms