Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb4Q91XZ6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdhb4Q91XZ6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb4Q91XZ6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb4Q91XZ6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Gm10232-201ENSMUST00000089221 720 ntBASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb4Q91XZ6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb4Q91XZ6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb4Q91XZ6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhb4Q91XZ6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb4Q91XZ6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb4Q91XZ6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb4Q91XZ6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb4Q91XZ6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb4Q91XZ6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb4Q91XZ6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb4Q91XZ6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb4Q91XZ6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhb4Q91XZ6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.07■□□□□ 0.8
Pcdhb4Q91XZ6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb4Q91XZ6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb4Q91XZ6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb4Q91XZ6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb4Q91XZ6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb4Q91XZ6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb4Q91XZ6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Gm10399-202ENSMUST00000202768 748 ntBASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb4Q91XZ6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb4Q91XZ6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Pcdhb4Q91XZ6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb4Q91XZ6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb4Q91XZ6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.02■□□□□ 0.8
Pcdhb4Q91XZ6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb4Q91XZ6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms