Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HnrnpuQ8VEK3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HnrnpuQ8VEK3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HnrnpuQ8VEK3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HnrnpuQ8VEK3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
HnrnpuQ8VEK3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HnrnpuQ8VEK3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.33■■□□□ 1.65
HnrnpuQ8VEK3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
HnrnpuQ8VEK3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HnrnpuQ8VEK3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HnrnpuQ8VEK3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HnrnpuQ8VEK3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.31■■□□□ 1.64
HnrnpuQ8VEK3 Gm9959-201ENSMUST00000068277 390 ntBASIC25.31■■□□□ 1.64
HnrnpuQ8VEK3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
HnrnpuQ8VEK3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
HnrnpuQ8VEK3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HnrnpuQ8VEK3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HnrnpuQ8VEK3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Hsf1-207ENSMUST00000228371 2102 ntBASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
HnrnpuQ8VEK3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HnrnpuQ8VEK3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC25.27■■□□□ 1.64
HnrnpuQ8VEK3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HnrnpuQ8VEK3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HnrnpuQ8VEK3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC25.27■■□□□ 1.64
HnrnpuQ8VEK3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HnrnpuQ8VEK3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HnrnpuQ8VEK3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HnrnpuQ8VEK3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HnrnpuQ8VEK3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HnrnpuQ8VEK3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HnrnpuQ8VEK3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC25.25■■□□□ 1.63
HnrnpuQ8VEK3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Gm9870-201ENSMUST00000063874 645 ntBASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
HnrnpuQ8VEK3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC25.23■■□□□ 1.63
HnrnpuQ8VEK3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HnrnpuQ8VEK3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HnrnpuQ8VEK3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms