Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpa1Q8VEE4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Rpa1Q8VEE4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpa1Q8VEE4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpa1Q8VEE4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Rpa1Q8VEE4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpa1Q8VEE4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rpa1Q8VEE4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.39■□□□□ 0.85
Rpa1Q8VEE4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpa1Q8VEE4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpa1Q8VEE4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpa1Q8VEE4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rpa1Q8VEE4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.37■□□□□ 0.85
Rpa1Q8VEE4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpa1Q8VEE4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpa1Q8VEE4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rpa1Q8VEE4 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rpa1Q8VEE4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.35■□□□□ 0.85
Rpa1Q8VEE4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpa1Q8VEE4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpa1Q8VEE4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpa1Q8VEE4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rpa1Q8VEE4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rpa1Q8VEE4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpa1Q8VEE4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpa1Q8VEE4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rpa1Q8VEE4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rpa1Q8VEE4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.34■□□□□ 0.85
Rpa1Q8VEE4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.34■□□□□ 0.85
Rpa1Q8VEE4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpa1Q8VEE4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpa1Q8VEE4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.33■□□□□ 0.85
Rpa1Q8VEE4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpa1Q8VEE4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpa1Q8VEE4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rpa1Q8VEE4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rpa1Q8VEE4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rpa1Q8VEE4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rpa1Q8VEE4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rpa1Q8VEE4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Mir6538-201ENSMUST00000183713 110 ntBASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rpa1Q8VEE4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms