Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC27.06■■□□□ 1.92
Ddx54Q8K4L0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx54Q8K4L0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx54Q8K4L0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx54Q8K4L0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx54Q8K4L0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx54Q8K4L0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx54Q8K4L0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx54Q8K4L0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx54Q8K4L0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx54Q8K4L0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx54Q8K4L0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ddx54Q8K4L0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC27.03■■□□□ 1.92
Ddx54Q8K4L0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC27.03■■□□□ 1.92
Ddx54Q8K4L0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ddx54Q8K4L0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx54Q8K4L0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC27.02■■□□□ 1.92
Ddx54Q8K4L0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx54Q8K4L0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx54Q8K4L0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
Ddx54Q8K4L0 Mir7071-201ENSMUST00000184847 69 ntBASIC27.01■■□□□ 1.91
Ddx54Q8K4L0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx54Q8K4L0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx54Q8K4L0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx54Q8K4L0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ddx54Q8K4L0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx54Q8K4L0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx54Q8K4L0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC27■■□□□ 1.91
Ddx54Q8K4L0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx54Q8K4L0 Gm13234-201ENSMUST00000120010 747 ntBASIC27■■□□□ 1.91
Ddx54Q8K4L0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC27■■□□□ 1.91
Ddx54Q8K4L0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx54Q8K4L0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx54Q8K4L0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
Ddx54Q8K4L0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC26.99■■□□□ 1.91
Ddx54Q8K4L0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ddx54Q8K4L0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx54Q8K4L0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx54Q8K4L0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx54Q8K4L0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
Ddx54Q8K4L0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx54Q8K4L0 Reep4-203ENSMUST00000226563 1444 ntBASIC26.97■■□□□ 1.91
Ddx54Q8K4L0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx54Q8K4L0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx54Q8K4L0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx54Q8K4L0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx54Q8K4L0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Ddx54Q8K4L0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Ddx54Q8K4L0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ddx54Q8K4L0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Gm20760-201ENSMUST00000179197 648 ntBASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Ddx54Q8K4L0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Mir5133-201ENSMUST00000174955 77 ntBASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Gm7514-201ENSMUST00000209475 934 ntBASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ddx54Q8K4L0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Ddx54Q8K4L0 Gm4968-201ENSMUST00000071458 858 ntBASIC26.92■■□□□ 1.9
Ddx54Q8K4L0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ddx54Q8K4L0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ddx54Q8K4L0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Ddx54Q8K4L0 Gm27045-201ENSMUST00000182145 1402 ntBASIC26.91■■□□□ 1.9
Ddx54Q8K4L0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx54Q8K4L0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC26.91■■□□□ 1.9
Ddx54Q8K4L0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Ddx54Q8K4L0 Ap3s1-204ENSMUST00000225520 957 ntBASIC26.91■■□□□ 1.9
Ddx54Q8K4L0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ddx54Q8K4L0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Ddx54Q8K4L0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms