Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.32■□□□□ 0.36
Lrrtm1Q8K377 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm1Q8K377 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm1Q8K377 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm1Q8K377 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrtm1Q8K377 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrtm1Q8K377 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Lrrtm1Q8K377 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Gm7332-201ENSMUST00000118351 454 ntBASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lrrtm1Q8K377 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrtm1Q8K377 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.27■□□□□ 0.36
Lrrtm1Q8K377 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Lrrtm1Q8K377 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrtm1Q8K377 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrtm1Q8K377 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lrrtm1Q8K377 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.25■□□□□ 0.35
Lrrtm1Q8K377 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lrrtm1Q8K377 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Lrrtm1Q8K377 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms