Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.42■□□□□ 0.7
Hmgcs1Q8JZK9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hmgcs1Q8JZK9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmgcs1Q8JZK9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hmgcs1Q8JZK9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hmgcs1Q8JZK9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hmgcs1Q8JZK9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgcs1Q8JZK9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgcs1Q8JZK9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgcs1Q8JZK9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgcs1Q8JZK9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmgcs1Q8JZK9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hmgcs1Q8JZK9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmgcs1Q8JZK9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmgcs1Q8JZK9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.35■□□□□ 0.69
Hmgcs1Q8JZK9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.34■□□□□ 0.69
Hmgcs1Q8JZK9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmgcs1Q8JZK9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hmgcs1Q8JZK9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.33■□□□□ 0.68
Hmgcs1Q8JZK9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.32■□□□□ 0.68
Hmgcs1Q8JZK9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms