Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.98■□□□□ 0.95
Calcoco1Q8CGU1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Calcoco1Q8CGU1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Calcoco1Q8CGU1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Calcoco1Q8CGU1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Calcoco1Q8CGU1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.96■□□□□ 0.95
Calcoco1Q8CGU1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Calcoco1Q8CGU1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.96■□□□□ 0.95
Calcoco1Q8CGU1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Calcoco1Q8CGU1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Calcoco1Q8CGU1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Calcoco1Q8CGU1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Calcoco1Q8CGU1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Calcoco1Q8CGU1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Calcoco1Q8CGU1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Calcoco1Q8CGU1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Calcoco1Q8CGU1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Calcoco1Q8CGU1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Calcoco1Q8CGU1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Calcoco1Q8CGU1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.91■□□□□ 0.94
Calcoco1Q8CGU1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Calcoco1Q8CGU1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Calcoco1Q8CGU1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.91■□□□□ 0.94
Calcoco1Q8CGU1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Calcoco1Q8CGU1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Calcoco1Q8CGU1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Calcoco1Q8CGU1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Calcoco1Q8CGU1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.89■□□□□ 0.93
Calcoco1Q8CGU1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.89■□□□□ 0.93
Calcoco1Q8CGU1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.89■□□□□ 0.93
Calcoco1Q8CGU1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.89■□□□□ 0.93
Calcoco1Q8CGU1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Calcoco1Q8CGU1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Calcoco1Q8CGU1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Calcoco1Q8CGU1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Calcoco1Q8CGU1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Calcoco1Q8CGU1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Calcoco1Q8CGU1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms