Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rp1l1Q8CGM2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.65■■□□□ 1.06
Rp1l1Q8CGM2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rp1l1Q8CGM2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rp1l1Q8CGM2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rp1l1Q8CGM2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rp1l1Q8CGM2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rp1l1Q8CGM2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rp1l1Q8CGM2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rp1l1Q8CGM2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rp1l1Q8CGM2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rp1l1Q8CGM2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rp1l1Q8CGM2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rp1l1Q8CGM2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Rp1l1Q8CGM2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rp1l1Q8CGM2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Gm10653-202ENSMUST00000139570 835 ntBASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Gm10602-201ENSMUST00000098239 609 ntBASIC21.6■■□□□ 1.05
Rp1l1Q8CGM2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rp1l1Q8CGM2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.59■■□□□ 1.05
Rp1l1Q8CGM2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rp1l1Q8CGM2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rp1l1Q8CGM2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rp1l1Q8CGM2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.59■■□□□ 1.05
Rp1l1Q8CGM2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rp1l1Q8CGM2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rp1l1Q8CGM2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rp1l1Q8CGM2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rp1l1Q8CGM2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rp1l1Q8CGM2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rp1l1Q8CGM2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rp1l1Q8CGM2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rp1l1Q8CGM2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rp1l1Q8CGM2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Gm12441-201ENSMUST00000121806 588 ntBASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.56■■□□□ 1.04
Rp1l1Q8CGM2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rp1l1Q8CGM2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rp1l1Q8CGM2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rp1l1Q8CGM2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rp1l1Q8CGM2 Gm13234-201ENSMUST00000120010 747 ntBASIC21.55■■□□□ 1.04
Rp1l1Q8CGM2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rp1l1Q8CGM2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rp1l1Q8CGM2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.54■■□□□ 1.04
Rp1l1Q8CGM2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms