Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.32■■□□□ 1.64
Smc5Q8CG46 Gm45444-201ENSMUST00000211394 898 ntBASIC25.32■■□□□ 1.64
Smc5Q8CG46 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Smc5Q8CG46 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC25.32■■□□□ 1.64
Smc5Q8CG46 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC25.32■■□□□ 1.64
Smc5Q8CG46 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.31■■□□□ 1.64
Smc5Q8CG46 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Smc5Q8CG46 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Smc5Q8CG46 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Smc5Q8CG46 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Smc5Q8CG46 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smc5Q8CG46 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Smc5Q8CG46 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc5Q8CG46 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc5Q8CG46 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Smc5Q8CG46 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.3■■□□□ 1.64
Smc5Q8CG46 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Smc5Q8CG46 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Gm43545-201ENSMUST00000196765 2779 ntBASIC25.29■■□□□ 1.64
Smc5Q8CG46 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smc5Q8CG46 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.28■■□□□ 1.64
Smc5Q8CG46 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Smc5Q8CG46 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc5Q8CG46 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Gm13238-201ENSMUST00000117655 780 ntBASIC25.27■■□□□ 1.64
Smc5Q8CG46 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smc5Q8CG46 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Smc5Q8CG46 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.26■■□□□ 1.63
Smc5Q8CG46 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Smc5Q8CG46 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Smc5Q8CG46 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC25.26■■□□□ 1.63
Smc5Q8CG46 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.26■■□□□ 1.63
Smc5Q8CG46 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Smc5Q8CG46 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Smc5Q8CG46 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Smc5Q8CG46 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
Smc5Q8CG46 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc5Q8CG46 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc5Q8CG46 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Smc5Q8CG46 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smc5Q8CG46 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Smc5Q8CG46 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC25.24■■□□□ 1.63
Smc5Q8CG46 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Smc5Q8CG46 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smc5Q8CG46 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smc5Q8CG46 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smc5Q8CG46 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smc5Q8CG46 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smc5Q8CG46 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smc5Q8CG46 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smc5Q8CG46 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Smc5Q8CG46 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Smc5Q8CG46 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.21■■□□□ 1.63
Smc5Q8CG46 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Smc5Q8CG46 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Smc5Q8CG46 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Smc5Q8CG46 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Smc5Q8CG46 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.2■■□□□ 1.62
Smc5Q8CG46 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.2■■□□□ 1.62
Smc5Q8CG46 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Smc5Q8CG46 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Smc5Q8CG46 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Smc5Q8CG46 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Smc5Q8CG46 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.19■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms