Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim9Q8C7M3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim9Q8C7M3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim9Q8C7M3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim9Q8C7M3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim9Q8C7M3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.49■■□□□ 1.19
Trim9Q8C7M3 Gm45102-201ENSMUST00000207427 857 ntBASIC22.49■■□□□ 1.19
Trim9Q8C7M3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim9Q8C7M3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Trim9Q8C7M3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim9Q8C7M3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Gm9870-201ENSMUST00000063874 645 ntBASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim9Q8C7M3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.47■■□□□ 1.19
Trim9Q8C7M3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim9Q8C7M3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim9Q8C7M3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim9Q8C7M3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim9Q8C7M3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
Trim9Q8C7M3 Gm22238-201ENSMUST00000175222 88 ntBASIC22.46■■□□□ 1.19
Trim9Q8C7M3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.46■■□□□ 1.19
Trim9Q8C7M3 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.46■■□□□ 1.19
Trim9Q8C7M3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Trim9Q8C7M3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim9Q8C7M3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim9Q8C7M3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim9Q8C7M3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim9Q8C7M3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
Trim9Q8C7M3 Gm14117-201ENSMUST00000122417 843 ntBASIC22.45■■□□□ 1.18
Trim9Q8C7M3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.45■■□□□ 1.18
Trim9Q8C7M3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim9Q8C7M3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim9Q8C7M3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim9Q8C7M3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Rps24-207ENSMUST00000224568 714 ntBASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Trim9Q8C7M3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Trim9Q8C7M3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim9Q8C7M3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim9Q8C7M3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Trim9Q8C7M3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim9Q8C7M3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim9Q8C7M3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim9Q8C7M3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim9Q8C7M3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim9Q8C7M3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim9Q8C7M3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.41■■□□□ 1.18
Trim9Q8C7M3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.41■■□□□ 1.18
Trim9Q8C7M3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms