Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Brat1Q8C3R1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Brat1Q8C3R1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.46■■□□□ 1.03
Brat1Q8C3R1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Brat1Q8C3R1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Brat1Q8C3R1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.03
Brat1Q8C3R1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Brat1Q8C3R1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Brat1Q8C3R1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Brat1Q8C3R1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Brat1Q8C3R1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Brat1Q8C3R1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Brat1Q8C3R1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Brat1Q8C3R1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Brat1Q8C3R1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Brat1Q8C3R1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Brat1Q8C3R1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Brat1Q8C3R1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Brat1Q8C3R1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.41■■□□□ 1.02
Brat1Q8C3R1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
Brat1Q8C3R1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Brat1Q8C3R1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Brat1Q8C3R1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Brat1Q8C3R1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Brat1Q8C3R1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Brat1Q8C3R1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Brat1Q8C3R1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Brat1Q8C3R1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Brat1Q8C3R1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Brat1Q8C3R1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Brat1Q8C3R1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Brat1Q8C3R1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Brat1Q8C3R1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Gm12821-201ENSMUST00000120022 600 ntBASIC21.38■■□□□ 1.01
Brat1Q8C3R1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Brat1Q8C3R1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Brat1Q8C3R1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Brat1Q8C3R1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.37■■□□□ 1.01
Brat1Q8C3R1 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.37■■□□□ 1.01
Brat1Q8C3R1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Brat1Q8C3R1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.37■■□□□ 1.01
Brat1Q8C3R1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Brat1Q8C3R1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms