Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap1Q8BTW8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap1Q8BTW8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap1Q8BTW8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdk5rap1Q8BTW8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cdk5rap1Q8BTW8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cdk5rap1Q8BTW8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap1Q8BTW8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Mir7075-201ENSMUST00000184187 82 ntBASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Gm6139-201ENSMUST00000079261 882 ntBASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap1Q8BTW8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap1Q8BTW8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap1Q8BTW8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.28■□□□□ 0.68
Cdk5rap1Q8BTW8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.28■□□□□ 0.68
Cdk5rap1Q8BTW8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap1Q8BTW8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap1Q8BTW8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.28■□□□□ 0.68
Cdk5rap1Q8BTW8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Cdk5rap1Q8BTW8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap1Q8BTW8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.27■□□□□ 0.68
Cdk5rap1Q8BTW8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cdk5rap1Q8BTW8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.27■□□□□ 0.68
Cdk5rap1Q8BTW8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap1Q8BTW8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk5rap1Q8BTW8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap1Q8BTW8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap1Q8BTW8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap1Q8BTW8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap1Q8BTW8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk5rap1Q8BTW8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdk5rap1Q8BTW8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cdk5rap1Q8BTW8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdk5rap1Q8BTW8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk5rap1Q8BTW8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap1Q8BTW8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cdk5rap1Q8BTW8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.22■□□□□ 0.67
Cdk5rap1Q8BTW8 Gm8493-201ENSMUST00000196881 489 ntBASIC19.22■□□□□ 0.67
Cdk5rap1Q8BTW8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk5rap1Q8BTW8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdk5rap1Q8BTW8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cdk5rap1Q8BTW8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdk5rap1Q8BTW8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms