Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sfr1Q8BP27 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Gm9847-201ENSMUST00000052528 599 ntBASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sfr1Q8BP27 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sfr1Q8BP27 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Sfr1Q8BP27 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sfr1Q8BP27 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sfr1Q8BP27 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sfr1Q8BP27 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Sfr1Q8BP27 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Golgb1-201ENSMUST00000023534 498 ntBASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sfr1Q8BP27 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Gm13241-201ENSMUST00000094493 780 ntBASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sfr1Q8BP27 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sfr1Q8BP27 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sfr1Q8BP27 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sfr1Q8BP27 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Sfr1Q8BP27 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sfr1Q8BP27 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sfr1Q8BP27 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sfr1Q8BP27 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Sfr1Q8BP27 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sfr1Q8BP27 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms