Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC27.33■■□□□ 1.97
Col16a1Q8BLX7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC27.33■■□□□ 1.97
Col16a1Q8BLX7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Col16a1Q8BLX7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Col16a1Q8BLX7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
Col16a1Q8BLX7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Col16a1Q8BLX7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC27.32■■□□□ 1.96
Col16a1Q8BLX7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC27.32■■□□□ 1.96
Col16a1Q8BLX7 AV356131-201ENSMUST00000206201 750 ntBASIC27.32■■□□□ 1.96
Col16a1Q8BLX7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col16a1Q8BLX7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC27.31■■□□□ 1.96
Col16a1Q8BLX7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Col16a1Q8BLX7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col16a1Q8BLX7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col16a1Q8BLX7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Col16a1Q8BLX7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Gm18671-201ENSMUST00000214826 683 ntBASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col16a1Q8BLX7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Col16a1Q8BLX7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Col16a1Q8BLX7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Col16a1Q8BLX7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC27.29■■□□□ 1.96
Col16a1Q8BLX7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC27.29■■□□□ 1.96
Col16a1Q8BLX7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Col16a1Q8BLX7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col16a1Q8BLX7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Col16a1Q8BLX7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Col16a1Q8BLX7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC27.28■■□□□ 1.96
Col16a1Q8BLX7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Col16a1Q8BLX7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Col16a1Q8BLX7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Col16a1Q8BLX7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC27.27■■□□□ 1.96
Col16a1Q8BLX7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Col16a1Q8BLX7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC27.26■■□□□ 1.96
Col16a1Q8BLX7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Col16a1Q8BLX7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Col16a1Q8BLX7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Col16a1Q8BLX7 Gm12669-201ENSMUST00000122162 1009 ntBASIC27.26■■□□□ 1.95
Col16a1Q8BLX7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Col16a1Q8BLX7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col16a1Q8BLX7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Col16a1Q8BLX7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col16a1Q8BLX7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col16a1Q8BLX7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col16a1Q8BLX7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC27.24■■□□□ 1.95
Col16a1Q8BLX7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Col16a1Q8BLX7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Col16a1Q8BLX7 Gm43403-201ENSMUST00000198011 1786 ntBASIC27.23■■□□□ 1.95
Col16a1Q8BLX7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Col16a1Q8BLX7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Col16a1Q8BLX7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC27.23■■□□□ 1.95
Col16a1Q8BLX7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col16a1Q8BLX7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Col16a1Q8BLX7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Col16a1Q8BLX7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col16a1Q8BLX7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Col16a1Q8BLX7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Col16a1Q8BLX7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col16a1Q8BLX7 Gm27045-201ENSMUST00000182145 1402 ntBASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Col16a1Q8BLX7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Col16a1Q8BLX7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC27.2■■□□□ 1.95
Col16a1Q8BLX7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
Col16a1Q8BLX7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Col16a1Q8BLX7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC27.2■■□□□ 1.94
Col16a1Q8BLX7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Col16a1Q8BLX7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Col16a1Q8BLX7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col16a1Q8BLX7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col16a1Q8BLX7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col16a1Q8BLX7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC27.19■■□□□ 1.94
Col16a1Q8BLX7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col16a1Q8BLX7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col16a1Q8BLX7 Gm37415-201ENSMUST00000192265 2054 ntBASIC27.18■■□□□ 1.94
Col16a1Q8BLX7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC27.18■■□□□ 1.94
Col16a1Q8BLX7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC27.18■■□□□ 1.94
Col16a1Q8BLX7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Col16a1Q8BLX7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC27.18■■□□□ 1.94
Col16a1Q8BLX7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col16a1Q8BLX7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms