Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.63■□□□□ 0.73
Rnf38Q8BI21 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf38Q8BI21 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf38Q8BI21 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf38Q8BI21 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.59■□□□□ 0.73
Rnf38Q8BI21 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf38Q8BI21 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf38Q8BI21 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf38Q8BI21 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf38Q8BI21 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rnf38Q8BI21 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Gm13238-201ENSMUST00000117655 780 ntBASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf38Q8BI21 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Gm45444-201ENSMUST00000211394 898 ntBASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf38Q8BI21 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf38Q8BI21 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf38Q8BI21 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf38Q8BI21 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.56■□□□□ 0.72
Rnf38Q8BI21 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf38Q8BI21 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf38Q8BI21 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf38Q8BI21 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms