Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.17■□□□□ 0.34
Upk3bQ80YF6 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Upk3bQ80YF6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Upk3bQ80YF6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Upk3bQ80YF6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Upk3bQ80YF6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Upk3bQ80YF6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Upk3bQ80YF6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upk3bQ80YF6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Gm11175-201ENSMUST00000116172 543 ntBASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms