Protein–RNA interactions for Protein: Q80VM3

Ttc29, Tetratricopeptide repeat protein 29, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc29Q80VM3 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Gm27454-201ENSMUST00000185090 204 ntBASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ttc29Q80VM3 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.48■□□□□ 0.71
Ttc29Q80VM3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ttc29Q80VM3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ttc29Q80VM3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ttc29Q80VM3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc29Q80VM3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc29Q80VM3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.44■□□□□ 0.7
Ttc29Q80VM3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ttc29Q80VM3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Gm45417-201ENSMUST00000209533 758 ntBASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Ttc29Q80VM3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ttc29Q80VM3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ttc29Q80VM3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.4■□□□□ 0.7
Ttc29Q80VM3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ttc29Q80VM3 Gm43530-201ENSMUST00000195920 274 ntBASIC19.4■□□□□ 0.7
Ttc29Q80VM3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ttc29Q80VM3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ttc29Q80VM3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc29Q80VM3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ttc29Q80VM3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ttc29Q80VM3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc29Q80VM3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc29Q80VM3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc29Q80VM3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc29Q80VM3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc29Q80VM3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ttc29Q80VM3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc29Q80VM3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.37■□□□□ 0.69
Ttc29Q80VM3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc29Q80VM3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ttc29Q80VM3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.37■□□□□ 0.69
Ttc29Q80VM3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms