Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh19Q80TF3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh19Q80TF3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.95■□□□□ 0.78
Pcdh19Q80TF3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.95■□□□□ 0.78
Pcdh19Q80TF3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.95■□□□□ 0.78
Pcdh19Q80TF3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh19Q80TF3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdh19Q80TF3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh19Q80TF3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Pcdh19Q80TF3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh19Q80TF3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.93■□□□□ 0.78
Pcdh19Q80TF3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh19Q80TF3 Serp2-204ENSMUST00000228055 705 ntBASIC19.93■□□□□ 0.78
Pcdh19Q80TF3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdh19Q80TF3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Mir7075-201ENSMUST00000184187 82 ntBASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh19Q80TF3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.91■□□□□ 0.78
Pcdh19Q80TF3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pcdh19Q80TF3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh19Q80TF3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh19Q80TF3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdh19Q80TF3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh19Q80TF3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Pcdh19Q80TF3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh19Q80TF3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh19Q80TF3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Gm6139-201ENSMUST00000079261 882 ntBASIC19.87■□□□□ 0.77
Pcdh19Q80TF3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms