Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cnih3Q6ZWS4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cnih3Q6ZWS4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cnih3Q6ZWS4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.71■□□□□ 0.59
Cnih3Q6ZWS4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cnih3Q6ZWS4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cnih3Q6ZWS4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cnih3Q6ZWS4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cnih3Q6ZWS4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cnih3Q6ZWS4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cnih3Q6ZWS4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnih3Q6ZWS4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnih3Q6ZWS4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.67■□□□□ 0.58
Cnih3Q6ZWS4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnih3Q6ZWS4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnih3Q6ZWS4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.67■□□□□ 0.58
Cnih3Q6ZWS4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cnih3Q6ZWS4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cnih3Q6ZWS4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cnih3Q6ZWS4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cnih3Q6ZWS4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Gm6311-201ENSMUST00000073790 878 ntBASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cnih3Q6ZWS4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnih3Q6ZWS4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cnih3Q6ZWS4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cnih3Q6ZWS4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnih3Q6ZWS4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cnih3Q6ZWS4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cnih3Q6ZWS4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnih3Q6ZWS4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnih3Q6ZWS4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnih3Q6ZWS4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnih3Q6ZWS4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnih3Q6ZWS4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnih3Q6ZWS4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cnih3Q6ZWS4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cnih3Q6ZWS4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms